species:   Artha
pid:       MI0029231
parent:    ath-MIR826b
paralog:   
locus:     4:1340521-1340614
matures:   ['UGGUUUUGGACACGUGAAAAU', 'UUUCACGUAUCCAAAACCGGA']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 4:1340521-1340614

2 out of bounds
849 alignments
9 proper strand
8 stranded perfect matches

          ***********************                            ***********************          
UAUGAGAUAAUCUGGUUUUGGACACGUGAAAAUUAACUUUUCACAGCAGCAAUAUGAUAUGAUUUUCACGUAUCCAAAACCGGACUAUAUCAUA
(((((.(((.((((((((((((.((((((((((((.....(((...........)))..)))))))))))).)))))))))))).))).)))))
------------UGGUUUUGGACACGUGAAAAU------------------------------------------------------------- l=21 a=5 c
---------------------------------------------------------------UUUCACGUAUCCAAAACCGGA---------- l=21 a=0 c*
------------UGGUUUUGGACACGUGAAAAU------------------------------------------------------------- l=21 a=5 ma
---------------------------------------------------------------UUUCACGUAUCCAAAACCGGA---------- l=21 a=0 ma*

------------UGGUUUUGGACACGUGAAAAU------------------------------------------------------------- l=21 a=5 (c,ma)
------------UGGUUUUGGACACGUGAAAAUUAA---------------------------------------------------------- l=24 a=1 
-------UAAUCUGGUUUUGGACACGUG------------------------------------------------------------------ l=21 a=2 
-------UAAUCaGGUUUUGGACACGUG------------------------------------------------------------------ l=21 a=1 

mb-01011
ax-1011011
ku-01
ss-111111011100
fn-101
